Friday, April 6, 2012

Biology 12 Mamaril Notes (Animal Reproduction and Development & Animal and Protozoan Diversity)


BIOLOGY 12
Mamaril Notes

Animal Reproduction and Development:

Features of living organisms:
-    Metabolism
-    Growth and development
-    Biological organization
-    Responsiveness to stimuli
o  Homeostasis, irritability
-    Reproduction
o  To maintain species
o  Different from the other currencies because it is done at certain stages in the life cycle

Increase in population = depletion of resources
-    ↑ competition
-    ↑ diseases
-    ↑ pollution
-    ↓ food
-    ↓ water

Biodiversity crisis – many species are on the verge of becoming extinct
__________________________________

Figure 52.21 – Human population growth

Year
Population
1650
0.5 billion
1850
1 billion
1930
2 billion
1975
4 billion
1987
5 billion
1999
6 billion (reached on October 12, 1999)

Figure 45.12
9000 BC – domestication of plants, animals (11k years ago)
5200 BC (est.) – agriculturally based urban societies
1600 AD – beginning of industrial, scientific revolutions

Projected population for 2050: 9 B or 11 B

Only our species has that kind of population growth!


Edward O. Wilson – naturalist
-    Entomologist – studied ants
-    Evolutionary and conservatory biologist
-    The Future of Life
Population of the world
Continent
Current Population
Projected Population for 2025
Asia
3.7 billion
4.7 billion
Europe
727 million
717 million
Africa
818 million
1.3 billion
South America
525 million
700 million
North America
316 million
382 million
Oceania
30 million
40 million

Population of the Philippines

Year
Population
2001
76.4 million
2002
80 million
2005
85.2 million
2008
88 million

-    In 2002, the Philippines was the 14th most populous country among 243 countries
-    2.37% growth rate from 1995 – 2000
-    2001 – we are the only Catholic country in Asia but we have the biggest growth rate

2002 statistics
-    Germany has a negative population growth
o  Population: 81.947
-    Vietnam has a positive population growth
o  Population: 80.305
o  1.7%
-     Brazil – 1.9
-    Mexico – 1.3

Demography
-    Population studies
-    Age-structure “pyramids”

Fig 52.23 – Age Structures of 3 Nations
-    Sweden – decreasing
-    US – many were born after World War II
o  Baby boom generation
o  Has a steady growth
-    Mexico – comparable to the Philippines or Afghanistan

Youth Bulge:
-    Youth: 15 years old – 24 years old
-    1980’s: youth bulge occurred in Hong Kong, Taiwan, and Singapore
-    Indonesia and Thailand’s youth bulge occurred in 2000s


-    Philippines:
o  Youth: 16 million (versus the 5 million in 1965)
o  It will peak at 2025 if present trends continue
o  23.8% of youth are having premarital sex
§ 11% of them are having sex with the same sex

__________________________________


Diliman Sex Study
-    1/3 do it
o  126 respondents had sex
-    Use of protection:
o  40% - sometimes
o  36% - always
o  24% - never
-    Kinds of protections used:
o  88% condom
o  10% birth control pills
o  12% rhythm

Several thousand years ago, the population growth was slow, but it increased rapidly in the latter part

Population Models:
1.  J-shaped
o  Exponential
o  Populations that are in ideal environments
o  Unlimited resources, no competition, no diseases
§ Resources: space, food, water, nutrients, light, humidity

Examples of species with a J shaped pop’n:
-    Human population*
-    Bacterial culture
o  Artificial population
-    Cyanobacterium (blue green algae)*
o  Laguna de Bay has Microcystis aeruginosa
o  Algal blooms can cause chronic damage to environment
§ Causes depletion of dissolved oxygen, so env becomes hypotoxic (low O2)
·      It may lead to death in some species (fish)
-    Insect pests*
o  Forests – budworm
o  Locust infestations
§ Can cause damage to crops
-    Mammals*
o  If hunting becomes illegal
o  Elephants, deer
* populations in the wild

The population can’t increase indefinitely because there is no such thing as unlimited resources

2.  Logistic Model
o  S-shaped/Sigmoidal growth
o  Carrying capacity (K)
§ Maximum number of individuals that can be supported by the environment without hurting the environment
§ Leads to a population crash
·      They will only stay at K or a little lower


Figure 52.15 – Lab population
-    Paramecium – K = 900
-    Daphnia – K = 135
o  Population crashed because it exceeded K
__________________________________

The human population increases rapidly in spite of:
1.   Humans have low fecundity
-    Fecundity – condition of the number of eggs that the species produces
-    400 oocytes produced in a woman’s reproductive life
o  Average: 6 offspring
o  Maximum: 12 dozen
o  Women: least fecund
-    In contrast to:
o  Common toad – 7,000 eggs per spawning
o  Herring (fish) – 50,000 EPS
o  Sturgeon (fish) – 6,000,000 EPS
§ In danger of becoming extinct because Europeans are hunting sturgeons to make caviar
·      Caviar: $200 per kilo
§ Pre-historic fish
§ Russian males eat caviar with vodka
§ The Russian population is declining  because the husbands get too drunk to have sex
o  Tapeworm – 6,000,000 eggs every year  for 35 years
§ Intestinal parasite
o  Queen termite – 11,000,000 eggs/year for 15 years



2.  Humans have one of the longest generation times:
-    Generation time – time (units) from the time an organism is born/hatched until they are able to have their first offspring
-    Generation time and body size are inversely proportional
-    Escherichia coli – one of the deadliest and most famous
o  for further breakdown of food in the large intestine
o  also make certain vitamins (Vit K) that the human body cannot produce through their metabolism
o  takes only 20 minutes for one to become two


Generation times of some species:
-    Protozoans – more or less a day
-    Arthropods – 1 week to a month
-    Small mammals – months to five years
-    Big mammals – 5 years to 10 years+

3.  Humans engage in sex
-    Our species is the only one that does things differently

In what ways are we weird?
a.  Ovulation is concealed
-    Vs ape relatives – advertised
o  Brightly colored genitals and swollen lips


Fig 15.12b: Our relatives: chimpanzees, gorillas, orangutans
-    2 species of chimpanzee:
o  Pan troglodytes – common chimp
o  Pan paniscuspygmy chimp
-    Similarity between chimps and humans in DNA: 98.4%


-    Jared Diamond – Why is Sex Fun? The Evolution of Human Sexuality
o  The Third Chimpanzee
o  Procreation à Recreation

b.  We have sex even when the woman is not ready to be pregnant
-    Menstruation
-    Menopause
c.  Copulation occurs in private
d.  Women undergo menopause (end of fertility)
__________________________________

Modes of Reproduction:
-    Asexual Reproduction
o  Reproduction of an individual without gametes (eggs/sperm). (Hickman, 1995)
o  Formation of an individual whose genes all come from one parent, without fusion of sperm and oocyte (egg)
o  Asexuals – organisms that reproduce asexually
-    Sexual reproduction
o  Reproduction with gametes

Asexual Reproduction
-    Almost always relies on mitotic cell division
Advantages:
o  Animals in isolation need not find mates
o  Numerous offspring formed in little time
§ Ideal for colonizing a habitat rapidly
o  Little energy expenditure
-    Beneficial in stable, favorable habitats, perpetuates successful genotypes precisely
-    Disadvantages:
o  Does not promote genetic variability
o  Offspring are clones
§ Genetically identical copies of a single parent

Cloning is advantageous only so long as:
-    The parents are highly adapted to the env
-    The env stays stable and favorable

Mechanisms of Asexual Reproduction:
1.  Fission
-    Splitting
-    Sea anemones, Planaria (flatworms)

2.  Budding
-    Parent produces a small copy at first
-    Cnidarians (hydra, hydrozoans), Annelids (freshwater oligochaetes, polychaetes)
-    Figure 33.6: The life cycle of the hydozoan Obelia
o  Buds appear as branches
-    Oligochaeta (Aolosoma hemprichii)
o  Aquatic
o  Buds appear at posterior end

3.  Fragmentation, then regeneration
o  Sponges, cnidarians, turnicates, echinoderms (especially sea stars)

4.  Gemmulation (formation of gemmules)
-    Unique to freshwater sponges (and a few marine sponges)
-    Gemmule – tiny ball but can be seen
-    Formed when the sponge senses that their spongeworld is becoming bad (unfavorable conditions)
-    It’s the quickest way to save themselves
-    Covering: spicules
o  For protection

Parthenogenesis
-    Development of the egg without fertilization
-    Sexual reproduction
-    In rotifers, cladocerans (Crustacea), aphids, honeybees, frogs, whiptail lizards, turkey
-    Only when conditions are just right
-    No mammals

1.  Rotifers
-    Mainly freshwater, free-living, pseudocoelomates

Groups of Rotifers:
a.  Bdelloid rotifers (Philodina)
-    Only have ovaries (paired)
-    They form eggs that pass through the colaca and anus in order to be deposited in the water
-    All of them are females
-    They have been here for 40 million years


Mamaril’s QOTD!
“No sex for 40 days and 40 nights? I’ll go crazy!”

b.  Monogonot rotifers (Brachionus)
-    Amictic females, amictic eggs
o  Amictic: no meiosis
-    Every egg becomes a new being
-    One ovary rotifer
-    Diploid parthenogenesis (2N)
-    Can do this process for as long as 40 generations, only if conditions are favorable
-    Mictic females, mictic eggs, unfertilized mictic egg à male!
o  Mictic: they make 2 kinds of eggs
§ Unfertilized haploid egg that becomes the male
o  The zygote produced will remain dormant until favorable conditions come. Then they will become female rotifers capable of parthenogenesis.


The male monogonot rotifer:
-    Smaller than the female because it has very little life and no digestive system.
-    It only has:
o  Cilia
o  Plenty sperm
o  One mission: to fertilize eggs of the female
§

Hypodermic impregnation:
·      He pricks the female’s skin with his tiny penis
-    Lives for only 2-3 days


Mamaril’s QOTD!
Mamaril:
 “When there is trouble in paradise, who are you going to call?”
Class:
 “…..”
Mamaril:
“Of course, the usual answer is Ghostbuster, but perhaps I am asking the wrong generation”

2.  Cladocera (Crustaceans)  - Daphnia
-    Almost all are females
-    Freshwater, found in temperate areas
-    Most studied (guinea pig of freshwater organisms)
-    Asexual eggs (parthenogenetic eggs) are produced during good times:
o  Favorable conditions (spring)
o  Brood pouch – 6 eggs
o  Viviparous young (live birth)
§ Come out like mother
-    Sexual eggs (ephippium, ephippia) are produced during bad times:
o  Fewer in number (3 eggs)
o  Need to be fertilized
o  Covered with chitin
o  Dropped in the lake à dormant
o  They hatch in favorable conditions (spring)

3.  Desert whiptail lizards – Cnemidophorus uniparens
-    Unisexual (all females)


Figure 46.3: Sexual behavior in parthenogenic lizards
-     “He” uses his tongue to flick at female to see if she is ready
-    “He” mounts “himself” on top of her and bites the skin of “her” neck
-    “He” bends “his” body until cloacal apposition (“cloacal kiss”) is possible
o  Doughnut position
o  Nothing is transferred; it only stimulates the female to release more eggs
§ Pseudocopulation
-    The second time around, they will reverse roles
o  Explanation: hormones!
-    The eggs develop through parthenogenesis


Quick notes about the lizards:
-    A lizard may still reproduce by parthenogenesis by herself
o  They only go through pseudocopulation in order to release more eggs
-    These lizards are doing it in this manner, yet their ancestors are bisexual (C. inornatus)

Sexual Reproduction
-    Mode of reproduction of majority
-    Formation of new individuals by fusion of haploid gametes to form a zygote
-    Gametes arise by meiosis
o  Female gamete (egg, ovum, oocyte)
§ Large and stationary
o  Male gamete (sperm, spermatozoon, sperm cells)
§ Much smaller and motile
§ Almost always has a flagellum (others are amoeboid)
§ Numerous
-    Advantage: promotes genetic variability
o  Generates unique combinations of genes inherited from 2 parents
o  Offspring have a variety of phenotypes
o  Enhances the reproductive success of the parents when environmental conditions change rapidly and adversely
-    Disadvantage: biologically expensive (bioenergetically costly/large energy outlay)

Why is sex expensive?
Full separation into male and female imposes biologically expensive demands
1.  All kinds of structural and behavioral adaptations to get sperm to the egg
a.   Behavioral terms
o   Male and female reproductive cycles must be synchronous (gametes released at the same time)
o  Complex hormonal control mechanisms and sensory receptors that detect such stimuli as longer days and other environmental cues (water, rain)
o  Means by which males and females recognize each other; energy outlays needed for coming up with structural signals as bright feathers and for performing courtship routines
§ The male is almost always the prettier of the two



Mamaril’s QOTD!
“Girls, no need! Wag na kayo magpaganda… no hope rin naman!”

b.  Structural terms (fertilization is less complicated among aquatic animals)
        i.  External fertilization – large number of sperm and eggs
       ii.  Internal fertilization – all-land dwelling animals and some aquatic forms
§ Fewer sperm are transferred

2.  Another requirement: nourishment of fertilized egg and protection of embryo
a.   Yolk – food for the embryo
        i.  No yolk
§ Mammals, except for egg bearing ones
§ Alecithal
§ Sea urchin egg – after 40 hours of fertilization, it reaches the larval stage and it is able to feed itself
       ii.  Moderate yolk
§ Mesolecithal 
§ Frog eggs
      iii.  Much yolk
§ Telolecithal
§ Bird eggs
b.  Parental care
        i.  Oviparous – eggs released outside
       ii.  Ovoviviparous – eggs develop within (usually in the oviduct) and hatched life from the mother’s body
§ Feeds on the yolk; the embryo has no connection to the mother’s tissue
§ Various annelids, some fishes (sharks), few snakes (copperhead), lizards, some brachiopods, gastropods
      iii.  Viviparous – egg is nourished directly from maternal tissues
§ Mammals

Sharks are oviparous, ovoviparous, and viviparous


Figure 6.2, Hickman
Whales
-    The male has a penis that is 3 m long
o  When the female is around, the penis takes a life of its own
o  After sex, he pulls it out and puts it inside his body
§ To avoid being damaged
§ And for hydrodynamics
-    Fertilization is  internal
Figure 46.8: Insect Reproductive Anatomy
Male:
-    Testis (where sperm is formed) à vas deferens à receives mat’l from seminal vesicle àpenis
-    Note: the penis is any structure as long as it can convey the sperm to the female.

Female:
-    Must be structurally adapted to receive sperm
-    Ovary à oviduct (fertilization) à spermatheca à vagina

Bees can’t stay long mating because they need to avoid predators

-    The male stores a lot of sperm in the spermatheca


How do animals find each other?
-    Male – rounded posterior end
-    Female – pointed posterior end

Pheromoneschemical compounds (metabolites)
-    Chemical signatures of animals
-    Airborne/waterborne
-    Catch attention of the opposite sex

Ex. Lepidoptera (butterflies and moths)
-    Female releases sex pheromones to the air.
-    The male flies to the female

What might smell good for one animal might be toxic to others

Do humans have pheromones?
-    Yes and No!
-    Before: Our ancestors had pheromones because they had no chance to look good
-    Now: modern humans do things that wash away sex pheromones
o  Bath products, esp. feminine wash (douching)


Mamaril’s QOTD!
Mamaril
“Girls, what do you do every day? It’s personal.”
Girl
“Wash my…”
Mamaril, scandalized:
“Don’t make it too personal!”
Girl
“Feminine wash”

German Shepherd - 225,000 olfactory cells
Humans – 5,000 olfactory cells

Separate sexes:
-    Dioecious = gonochoristic
United sexes:
-     Monoecious = hermaphroditism
-    They have difficulties finding suitable partners


Figure 46.6: Reproductive Anatomy of a Parasitic Flatworm
-    Chinese liver fluke (Clonorchis sinesis)
o  Oriental liver fluke
o  Found in bile ducts
o  Waits for another Oriental liver fluke and they exchange sperm
§ As a rule, cross-fertilization must be practiced

Figure 19-18: Earthworm Reproduction
-    External fertilization


Simultaneous hermaphroditism
Sequential hermaphroditism
-    Marine gastropod: Slipper shell limpet (Crepidula fornicata)
o  Larva of gastropods – veliger (free swimming)
-    Gonads are not present at the same time
-    Male before – intersex
-    Protandrymale à female
o  May return to being a male after
-    Protogynyfemale à male
o  Ex. coral reef wrasse

What makes the veliger larvae always turn out into males?
-    The female releases sex pheromones to the water

__________________________________


Figure 51.19: Courtship behavior in the three-spined stickleback
-    Freshwater fish
-    Male: the belly is red and shimmery

1.  F appears
2.  M swims zigzag to the F
3.  M swims toward nest
4.  F follows
5.  M shows entrance to nest
6.  F enters nest
7.  M prods F’s tale with trembling movements
8.  F spawns and leaves
9.  M enters the nest and fertilizes the eggs

In the North Pacific Ocean, 7 species of the Pacific Salmon have been identified
-    Oncorhynchus tshawytscha
-    They only enter a certain river to reproduce
-    They swim upstream (this is difficult and dangerous because of the predators, rapids, waterfalls, etc)
-    Once in the head waters, the male builds the nest immediately
-    The young go back downstream until they reach the Pacific Ocean. They will grow and live there until it’s time to breed again.
-    After they breed, they stay in the head waters and die
-    Head waters – cradle and grave

-    Semelparity (semelparous) Condition  in which organisms take a long time before they breed;
o  They breed only once, then they die
o  Pacific Salmons are the only animals known to do this
o  Other examples of plants: agave, bamboo (takes a century)
-    Iteroparity (iteroparous) – repeated reproduction


Figure 29-26: Life cycle of a leopard frog
1.  It takes 3 years to become sexually mature
o  They do it at night, in water
o  The males croak
o  They only breed with the same species
§ They are able to distinguish other species through the sound the male makes (“frog call”)
2.  Male clasps female (amplexus), eggs are fertilized as they are shed
o  Male is smaller, on top
§ Inner digits are swollen
·      To assist him in amplexus
3.  Eggs – surrounded by jelly coats
o  Can float, sticky (can attach to plants)
o  Jelly coat – for insulation
4.  Cleavage
5.  Embryo nourished by yolk
o  tail bud stage
6.  Tadpole begins feeding on algae after he wiggles himself out of the jelly
o  external gills
o  Herbivore!
7.  Skin fold grows over external gill, water exits through spiracle
8.  Hindlimbs, then forelimbs emerge
9.  The tail shortens by reabsorption, metamorphosis nearing completion

-    Froglet – young of frog
o  Becomes a carnivore/insectivore
-    The leopard frog does not take care of its eggs

Maternal Care for Frogs:
Figure 29-4: Reproductive Strategies of Anurans
1.  Pygmy marsupial frogs
o  Flectonotus pygmaeus
o  Live in trees, their only access to water is rain
o  Females have a dorsal brood chamber where eggs develop
2.  Surinam frogs
o  Females have holes (concavities) on their backs
§ Where eggs develop until they become froglets
3.  Poison arrow frogs
o  Tadpoles cling to the back of the male (paternal care)
o  Phyllobates bicolor
4.  Darwin’s frog
o  Rhinoderma darwinii
o  No access to water, so the inside of the male’s body is the only moist environment.
o  The male keeps the eggs in his vocal pouch until they become froglets
__________________________________

Human Reproduction
Figure 46.8: Reproductive anatomy of human male
-    Testis
-    Epididymis
o  Where sperm mature
o  If stretched, it goes as long as 5 m
-    Floats in luminal fluid up the vas deferens
o  74 days until it reaches the ejaculatory duct
-    Ejaculatory duct
o  receives secretions from:
§  Bulbourethral glands
·      Mucus-like substance - lubrication
§ Seminal vesicles
·      Fructose – energy source of sperm
·      Prostaglandins – have no function while inside male
o   Cause contractions of the uterus
§ Prostate gland
·      Alkaline – neutralize pH of the vagina (pH 3.8 – 4.2)
o  Masturbation: sperm die immediately
-    Urethra, if sexually active
Sperm can stay in the vagina for 72 hours/3 days

-    Scrotum – outside the abdominal cavity
o  Evolutionary reason:
§ To help maintain the temperature suitable for sperm formation
§ 34 oC
o  Sometimes, the testes don’t descend from inside the abdominal cavity
§ Temperature inside the abdominal cavity: 38 oC
·      Inhibitory for sperm formation
§ Cryptorchidism
·      Infertile man!
·      He does not have the right number, nor the right kind of sperm
-    Seminiferous tubules – where spermatogenesis occurs
o  Leads to a network called the rete testis

Sperm + Secretions = SEMEN
Semen:
-    Body fluid (just like tears and saliva)
-    Colorless, tasteless, nutritious
o  Rich in protein – 30% more than cow milk
o  Low in calories – 1/9 of sugar and fat in cow milk


Mamaril’s QOTD!
“Class, I am not encouraging you to engage in activities that involve eating semen. I don’t want you running to your mothers saying, ‘Mommy! Mommy! Semen pala, according to our Bio 12 lecture, is yummy yummy!”

Stratified epithelial tissue
-    Basement membrane
o  Spermatogonia lie here
§ When born, this is what males have
o  Sexual maturity à 1o spermatocytes
§ Beginning of spermatogenesis
o  2o spermatocytes à meiosis II
o  Stem cells: starting cells
o  End: 4 haploid sperm

Non Spermatogenic Cells:
1.  Sertoli Cells
-    Nurse cells, sustentacular cells
-    Provide nourishment to spermatids until they become sperm
-    Believed to release inhibin (exerts negative feedback on anterior pituitary and hypothalamus)


Figure 27.9B: Structure of a Human Sperm Cell
-    Sperm – result of spermatid losing its cytoplasm
o  Head:
§ Nucleusmost important part
§ Acrosome – cap that contains minute amounts of digestive enzymes
·      Used to gain entry to the egg cell – nuclear warhead
o  Neck
§ Mitochondrion – supplies energy
§ Centriole
o  Flagellum
§ Have microtubules made of protein tubulin (similar to actin)
·      Provides strength to sperm

2.  Interstitial Cells
-    Interstitial endocrinocytes, Leydig cells
-    Found in interstices between adjacent seminiferous tubules
-    Synthesize the male sex hormones
o  Androgens – testosterone


Figure 4-8: A Comparison of Functional Groups of Female (estradiol) and Male (testosterone) sex hormones
-    Male lion – symbol of male sex
o  Testosterone : O, CH3, CH3, OH (mandatory fxnl groups)
o  Gives all the male characteristics
§ Mane – attractive to lioness
-    Female lion
o  Estradiol: HO, CH3, OH
-    Lifestyle:
o  The lion stays at home while the lioness hunts. The food is offered first to the lion and the leftovers are given to the cubs.

Figure 26.3: The Major Endocrine Glands in Humans
-    Ovary – where sex hormones for females are made
-    Adrenal cortex – other source of sex hormones

Estradiol and testosterone can be synthesized from cholesterol à Steroids!

All of us have testosterone and estradiol
The reproductive system takes orders from the hypothalamus
-    Does its regulation via pituitary gland/hypophysis

Figure 26.4A: Location of the Hypothalamus and Pituitary
-    Anterior pituitary gland (APG)
o  Infundibulum – links APG to hypophysis
o  Releases FSH and LH

Process:
-    Nerve cells in hypothalamus release gonadotropin releasing hormones
-    Stimulates APG to release FSH and LH
-    Blood stream
-    Target organs

Figure 46.14: Hormonal Control of the Testes
-    Refer to book
-    FSH – works through Sertoli cells to promote spermatogenesis
-    LH – ICSH (Interstitial cell stimulating hormone)
o  Works through Leydig cells
o  Testosterone:
§ Spermatogenesis
§ 1o and 2o sex characteristics

-    Testosterone sends message to APG and hypothalamus to slow down to prevent overproduction of sperm and over secretion of testosterone.
_________________________________

Testes à ejaculatory duct (74 days)
Spermatogonium à sperm (65-75 days)
Sperm produced: 300 M daily

What is happening to sperm in men?
-    1996,  Brit Med J
o  Men born after 1970 had a sperm count 25% lower than those born before 1959
-    1995, Study of men in Paris, France
o  2.1% annual decline over the past 20 years
-    1992,  Skakkebaek et al
o  Covered 15,000 men from 21 countries combining results of 61 separate studies over the past 50 years: decline from about 113 M per mL in 1938 to 66 M in 1990 – a plunge of nearly 50%
-    Decline of quality of sperm
-    Increase of incidence of testicular cancer and undescended testes
What may be causing oligospermy?
-    Stress, smoking, drug use
-    Men having children later in life
-    Increase in STDs
-    Shift from boxer shorts (gives ventilation) to briefs
-    Environmental pollutants such as DDT (insecticide that combats malaria and insect pests especially after WWII), some forms of dioxins (dirty dozen), PCBs (used in computers) and a number of synthetic substances – environmental estrogens or xenoestrogens (POPS)
o  Concern: they bind with receptors that normally recognize estrogens and other natural hormones, fooling the body into thinking that they are natural estrogens
o  For men: natural estrogens work in testes (rete testis)
§ Reabsorb the components of luminal fluid: ions, proteins, water
§ Make the sperm more concentrated


Lab tests: small amounts of industrial chemicals, delivered at a crucial stage of fetal development, can “feminize” a male embryo
-    Smaller testicles, low sperm output, miniscule penis
-    For extreme cases, some don’t have a penis at all

How many sperm must a man house to be considered fertile?
-    48 million mL, where > 63% are motile sperm
-    Infertile man:
o  < 13.5 million mL-1, where < 32% are motile sperm


Mamaril’s take home messages!
-    Check the equipment (testes should have descended)
-    He should have the right number of sperm



Mamaril’s QOTD!
“When I got married to my wife, we signed a contract stating that I will always have the last word, and my last words are always ‘yes, I’ll do it.”





Figure 27. 2C: Sideview of the female reproductive anatomy
-    Ovaries – where part of oogenesis takes place
o  Every 20 days a 2o oocyte is released and goes to the fallopian tube where it could be fertilized
o  Lifespan of oocyte: 48 hours
o  Release oocyte alternately
-    Vagina
o  Passage of baby during delivery
o  Where sperm are deposited
o  Where sperm die
o  Passage of menstrual flow

What makes the vagina acidic?
-    Bacterium: Lactobacillus acidophilus
o  As they metabolize, they produce lactic acid
o  Same bacterium used in yogurt

Why do we need an acidic vagina?
-    Kills the pathogenic bacteria that enters the vagina
-    Kills sperm

-    The egg is held along the ciliated cells of the fallopian tube
-    When no fertilization occurs, the endometrium is sloughed off
-    Sometimes the blastula is implanted in the oviduct or abdominal cavity
o  Ectopic pregnancy – must have embryo taken out by surgery

Figure 44.6a: The position of the female reproductive system relative to the pelvic girdle and urinary bladder
-    The reproductive system is protected by the pelvic girdle

Figure 46.16: Formation of the zygote and early post-fertilization events
1.     Fertilization
o  Conception, act of conceiving
2.     Cleavage
3.     Blastocyst implants
o  Start of pregnancy

Figure 27.4 B: Meiosis in Oogenesis
-    Embryos: oogonia
-    Birth: 1o oocyte, no oogonia anymore
o  Arrested in prophase of meiosis I
o  400,000
-    Sexual maturity/puberty: one 1o oocyte starts to develop (released)
-    Ovulation: 2o oocyte (N) – 400 only
o  Remain as such until there is sperm
-    Menopause: no more ovulation

Differences between oogenesis and spermatogenesis:
-    Both start with stem cells
-    One 2o oocyte is produced
o  For boys, two 2o spermatocytes are formed
-    Only 1 egg is formed
-    Males do it for life

Figure 46.11: Human Oogenesis
-    Follicle cells – make estrogen and progesterone
-    Ovary – can be considered an endocrine gland
-    14th day of menstruation – fully mature follicle – triggers the release of the 2o oocyte
o  The follicle becomes the corpus luteum.
§ Continues to release the same hormones, but produces larger quantities of progesterone and less quantities of estrogen
o  Not pregnant: after 10 days, the corpus luteum shrivels until it sinks into the substance of the ovary
o  Pregnant: the corpus luteum stays until the 1st trimester, then it shrinks

Female reproductive cycles in mammals:
Estrous cycle
Menstrual cycle
Non-primate mammals and a few primates
Mainly in women and few primates
Advertised ovulation

Estrus phase – only when mammals engage in sex. When the female is sexually receptive
“in heat”
Concealed ovulation
Endometrium is not sloughed off
Endometrium is shed (menstrual flow)


Figure 46.15: The reproductive cycle of the human female
-    28 days

Ovarian cycle:
-    Primary follicle
-    Growing follicle                       Follicular phase  
-    Graafian follicle
-    Ovulation
-    Corpus luteum                             Luteal
-    Disintegrating corpus luteum        phase
Hormones:
-    Estrogen – high amounts before ovulation
o  To prepare the uterus for possible implantation
o  Builds endometrium and connective tissues
-    Progesterone
o  Brings about growth of blood vessels
§ Increases after ovulation
o  Brings about accumulation of glycogen and enzymes
-    Follicle-stimulating hormone (FSH)
o  Development of follicle (keeps oocyte)
o  Present until LH peaks
o  Low estrogen à prevent other follicles from developing
-    Luteinizing hormone (LH)
o  High LH + high estrogen = ovulation
o  Functions:
§ Triggers ovulation
§ Brings about change from residual follicle to corpus luteum
§ Drives corpus luteum to stay for a while for progesterone

When should a woman have sex?
-    Days 13-17
__________________________________

See table 27.7: STDS common in the US
-    Trichomoniasis


Fact of life #4589439:
Without contraception 85 pregnancies would occur

How would the woman know that she is ovulating?
-    Ovulation predictor test kits

How do men have sex?
-    Erectile tissue – virtually empty spaces
o  Corpora cavernosa
o  A cascade of chemical events trigger erection
-    Process of erection:
o  Arousal à
o  Parasympathetic nerves à
o  release L-arginine à
o  Enzyme 1 à
o  Nitric Oxide (NO) à
o  Guanylate cyclase à
o  cGMP (cyclic guanosine monophosphate
§ relaxes and dilates blood vessels in the penis. Blood remains here longer

-    Process of ejaculation
o  400 M sperm in 3.5 mL
-    Enzyme 2 – breaks down nitric oxide

Erectile dysfunction
-    Failure to release semen
-    Solution: Viagra (1998)
o  Has Sildenafil citrate
o  Works by preventing enzyme 2
o  Pfizer (earns 1 B a year because of this!)

Difficulties of a sperm’s life:
1.  Sperm have to survive the journey to the urethra
o  Subject to intense shearing forces
o  Travel 5 m/s
o  Have a flagellum that keeps them intact
2.  Acidic vagina
3.  Cervical mucus
o  Prostaglandins
4.  Hostile environment of the uterus
o  Sperm capacitation:
§ Gives a bath of glucose to sperm
§ Proteins
o  WBC see sperm as foreign bodies
o  There are only a few hundred thousand sperm left at this point
5.  Fallopian tube
o  only 200 at this point             


Mamaril’s take home message!
-    Getting pregnant is not that simple


Fact of life #82947329:
30% of pregnancies end up in spontaneous abortion/miscarriage

Life lessons from Professor Mamaril:
How to Make Babies
Problems:
-    Man infertile; oligospermy; sperm not motile enough
-    Female infertile; failure to ovulate; blockage in oviducts
-    Sexually transmissible diseases – often produce scar tissue that blocks the oviducs
-    Antibodies produced in uterus immobilize sperm

Solutions: reproductive technology
1.  Hormone therapy – to increase production of sperm or oocyte
2.  Surgery – correct disorders like blocked oviducts
3.  Cryoperservation – sperm banks; oocyte storage
o  Stored in liquid nitrogen
4.  Assisted reproductive technology (ART)
a.    In vitro fertilization (IVF)
§ Culture dish; up to 8 cells
§ Taken from gonads
§ When in the 8 cell stage, the secondary oocyte is brought to the oviduct
b.   Zygote intrafallopian transfer (ZIFT)
§ Zygote placed in oviduct
c.    Gamete intrafallopian transfer (GIFT)
§ Oocyte and sperm are placed in the oviduct
d.   Surrogate motherhood
§ Has ethical and legal problems


November 13, 2004
-    Frances Harris (Georgia, USA)
o  5 children, pregnant with twins
o  59 y/o, menopausal
o  Had tubal ligation
o  Divorced from Raymond

January 18, 2005
-    Romania
o  World’s oldest mom – 66 y/o
o  Triplets, but only 1 survived


Mamaril’s QOTD:
Mamaril:
“Why shouldn’t old women have babies?”
Migs:
“Because they won’t be able to take care of the kids”
Mamaril:
“That’s the serious answer. I’m not looking for the serious answer. The less serious answer is: the women might forget where they left their babies.”


Cloning 101: How to make your own clone
1.  Remove nucleus from the egg cell
o  Secondary oocyte, haploid
2.  Add the nucleus from a somate cell from adult donor
3.  Grow in culture to produce an early embryo (Blastocyst)
4.  Blastula implanted in another female


Roslin Institute (Edinburgh, Scotland)
-    Dr. Ian Wilmot
-    Successful cloning – July 1996
o  Announcement: Feb 1997
-    Dolly
o 

Named after Dolly Parton because the nucleus brought in there was from the mammary glands
o  3 ewes involved
§ Source of secondary oocyte
§ Source of nucleus
§ Surrogate mother
o  Died February 2003. Got a viral infection and lung disease.
o  6 y/o

Figure 43.4: Overview of the stages of animal development
1.  Gamete formation
2.  Fertilization
3.  Cleavage
4.  Gastrulation
*** Neurolation – development of the nervous system
o  First organ system to develop because it regulates everything else
5.  Organogenesis
6.  Growth, tissue specialization

External fertilization of sea urchins:
-    They release gametes to water

How do these sperm and eggs find each other?
Problems:
1.  Water movements
a.     Waves
b.     Current
c.     Tide
2.  Big sea
3.  Simultaneous spawning

Solution:
-    Oocytes have chemotactic factors
o  Dispersed and picked up by the sperm
o  Species-specific
o  Lock and key principle
















Animal Kingdom
    Phylum Protozoa
        Class 1: Mastigophora
o  Move and fed by means of flagellum
Class 2: Sporoza
o  Spore-formers
   Class 3: Sarcodina
o  By pseudopodia
Class 4: Ciliophora

Plant Kingdom
        Bacteria
        Algae
        Fungi
        Bryophytes
        Tracheophytes

Sarcomastigophora – super class, combination of sarcodina and mastigophora because they are super similar

Protozoa – phylum of single-celled animals (before)

-    Botany wanted Mastigophora and Algae (flagellated and photosynthetic)

3 Kingdom Scheme:
-    Protozoa à Kingdom Protista
o  Included algae at that time
o  Monera:
§ Bacteria
§ 1 group of algae
o  Fungi had its own kingdom
o  What was left: bryophytes, tracheophytes

Figure 28.3 Semantics and Phylogeny of Eukaryotes
-    Ernst Haeckel

a.  Five Kingdom System
Monera Protista Plantae Fungi Animalia

b.  Eight Kingdom System
Bacteria  Archaea
Archaezoa Protista (Protozoa) Chromista Plantae Fungi Animalia

c.  Three Domain System
o  Domain Bacteria
o  Domain Archaea
o  Domain Eukarya

PROTISTS
-    1674 – Antoni Van Leeuwenhoek
-    37,000-38,000 species (+44,000 fossil species) of protozoan protists
-    Even a low-power microscope can reveal a great variety of organisms in a drop of pond water
-    Protist – informal name of the kingdom of mostly 1-cell eukaryotes
-    Advances in eukaryotic systematic have caused the classification of protists to change significantly
-    Protists constitute a polyphyletic group, and Protista is no longer valid as a kingdom

Figure 26.2: Kingdom Protista Problem
-    Choanoflagellates – protists but related to animals
-    Fungi are closer to animals

Structural and Functional Diversity in Protists
-    Protists exhibit more structural and functional diversity than any other group of eukaryotes
-    Single-celled protists can be very complex, and all biological forms are carried by organelles in each individual cell
-    The most nutritionally diverse of all eukaryotes
o  Photoautotrophs – chloroplasts
o  Heterotrophs – absorb organic molecules or ingest larger food particles
o  Mixotrophs – combine photosynthesis and heterotrophic nutrition
o  Can be exclusively photosynthetic, but under certain conditions, this is impossible so they resort to heterotrophy. They can switch back to photosynthesis after.
-    Can reproduce asexually/sexually or by sexual processes of meiosis and syngamy

Endosymbiosis in Eukaryotic Evolution
-    Endosymbiosis – process in which certain unicellular organisms engulf other cells, which become endosymbiotic and ultimately organelles in the host cell
-    There is now considerable evidence that much protist diversity has its origins in endosymbiosis
o  We are all descendants of bacteria
-    Mitochondria evolved by endosymbiosis if an aerobic prokaryote
-    Plastids evolved by endosymbiosis by means of a photosynthetic cyanobacterium
o  Gave rise to red algae and green algae
-    Green algae underwent secondary endosymbiosis   
o  They were ingested in the food vacuole of heterotrophic eukaryotes and became endosymbiotic themselves
§ Ex. Chlorarachniophytes

The Five Supergroups of Eukaryotes
-    No longer thought that amitochondriates are the oldest lineage of eukaryotes
-    Our understanding of the relationships among protist groups continues to change rapidly
-    One hypothesis divides all eukaryotes into 5 supergroups:
o  Excarta, Chromalveolata, Archaeplastids, Rhizaria, Unikonta

1.  Excavata
-    characterized by its exoskeleton

a.  Diplomonads
o  Have modified mitochondria called mitosomes
o  Derive energy anaerobically through glycolysis
o  Have two equal sized nuclei and many flagella


Giardia intestinalis
-    May be in the intestine of humans, and in wild and domestic animals
-    Millions of cysts pass in the feces
-    Wilderness streams or lakes are contaminated with cysts
-    Cysts are durable; they may last for 2-3 months
-    Cysts can be taken by drinking contaminated water

b.  Parabasalids
o  Have reduced mitochondria called hydrogenosomes that generate some energy anaerobically
o  Trichomonas vaginalis – greatest infection


Trichomonas vaginalis
-    Largest (7-32 micrometers long) of trichomonads present in humans
-    Inhibits vagina primarily; associated w lowered acidity
-    Treatment: suppositories, douche with dilute vinegar, powders containing boric acid or acid creams or jellies, antibiotics
-    Males: invades prostate
-    STD


c.   Euglenozoans
o  diverse clade that includes predatory heterotrophs, photosynthetic autotrophs

        i.  Kinetoplastids
§ Single mitochondrion with an organized mass of DNA – kinetoplast
§ Trypanosoma – causes sleeping sickness in humans


Trypanosoma congolense
-    Disc-shaped DNA containing organelle within a large mitochondrion
-    3 subspecies:
o  Trypanosoma brucei
o  Trypanosoma gambiense
o  Trypanosoma rhodesiense
-    Trypanosomiasis
-    Vector: tse-tse fly Glossina (insecta: Diptera)

ii. Euglenids
§ 1 or 2 flagella that emerge from a pocket at one end of the cell
§ Some species can be both autotrophic and heterotrophic
§ Parts:
·      Light detector
·      Eyespot
·      Short flagellum
·      Long flagellum


Budofree living and does not harm anyone

2.  Chromalveolates
o Alveolates
o Stramenopiles

a.  Dinoflagellates
o Freshwater
o Cells that are reinforced by cellulose plates
o Mixotrophic or heterotrophic
o Dinoflagellate blooms – “red tide”


Rodney Barker
-    All the Waters Turned into Blood
o  About dinoflagellates


Pyrodinium bahamense var compressum
-    First discovered in the Red Sea
-    Causes red tides in the Philippines
Pyrodinium bahamense var bahamense
-    Never been reported as toxic



Pfiesteria piscicida
-    In North Atlantic Ocean
-    24 stages in life cycle:
o Cyst – bottom à breakout into flagellates
o Flagellated stages suck out juices of menhader and oily fishes, amoeboid stages feast of the dead fish
-    Called “the cell from hell”
Ceratium hirundinella, Notiluca
-    Bioluminescent
Zooxanthellae
-    Endosymbionts in hard corals in gastrodermis of hermatypic corals

b.  Apicomplexans
o Parasites of animals and can cause serious human diseases
o One end – apex – contains a complex set of organelles specialized for penetrating a host
o Have a non-photosynthetic plastid, the apicoplast
o Complex life cycles
o Not motile



Plasmodium
-    Causes malaria
-    Number 1 parasite killer
-    Requires both mosquitos and humans to complete its life cycle
-    Approximately 2 million (1%) die each year from malaria
-    200 million – 300 million victims of malaria
-    Efforts are ongoing to develop vaccines that target this pathogen

-    Vector: mosquito Anopheles (Diptera), female
-    No. of species of mosquitoes: 3000-3500
o Anopheles: 100
o Those that transmit malaria: < 2 dozen

Species and periodicities of episodes of chills and fevers:
-    Plasmodium vivax
o Tertian/benign malaria, every 48 hours
-    Plasmodium falciparum
o Subetertian, malignant tertian malaria, every 40 – 48 hours
o Most virulent

-    Schizogony – asexual reproduction of Plasmodium
-    Plasmodium falciparum Erythrocyte Membrane Protein (PfEMP1) – mediates adhesion to host cells
-   

See life cycle of Plasmodium, Figure 28.10 (Campbell)
-    Merozite

Peritrophic membrane of the gut:
-    SM1 gene
-    PLA 2 gene
-    Both multiple effector genes.
-    From another mosquito. These are inserted to the genome of the other mosquito to prevent ookinete from becoming oocyot
-    Single chain antibody
-    Genetically modified Anopheles

Difficulties in controlling malaria:
The vector mosquito Anopheles:
-    Persistence of breeding places
-    Different susceptibilities of Anopheles individuals to insecticides
The human host:
-    Exposure to the mosquito
Parasite:
-    Alters surface chemistry of RBC so that RBC sticks to the tissue lining of the blood vessel
-    Intracellular
-    Different species of Plasmodium
-    Different stages of Plasmodium

c.  Ciliates
-    Micronuclei – function during conjugation, a sexual process that produces genetic variation
-    Conjugation – separate from reproduction (binary fission)
-    Macronuclei – control the everyday functions of the cell, such as feeding, waste removal, and maintaining water balance

3.  Rhizarians
-    Have threadlike pseudopodia

a.  Forams/foraminiferans
o  Tests – porous multichambered shells that hardened with calcium carbonate.

b.  Radiolarians
o  Delicate, symmetrical skeletons made of silica

4.  Unikonta

a.  Amoebozoans
o  Amoebas that have lobe- or tube-shaped pseudopodia


i.  Entamoebas
§ Parasites
§ Infect all classes of vertebrates as well as some invertebrates


Entamoeba gingivalis
-    Stays inside the mouth
o  Feeds on bacteria
-    Acquired through oral contact
Entamoeba histolytica
-    Number 3 parasite killer
-    Causes amoebic dysentery
-    Spread via contaminated drinking water, food, or eating utensils
-    100,000 deaths worldwide per year
Iodamoeba buetschii
-    May cause intestinal ulceration in humans

Life cycle of Naegleria fowleri
-    Causes primary amoebic meningoencephalitis (PAM)
-    Found in hot springs (they enjoy high temperatures)

__________________________________

INVERTEBRATES
-    Spirobranchus giganteus – “Christmas tree worm”
o  the main part is wrapped in a calcareous tube
o  pink – tentacles )radioles)
§ for gas exchange and capturing food


Charles Darwin
-    Talked about:
o  How different species have come about
o  Diversity and unity
o  1,300,000 species of animals
-    12 Feb 1809 – birthday
-    24 Nov 1959 – wrote a book
o  150th anniversary of the publication of his book “The Origin of Species”
§ Editor: James D. Watson
-    27 Dec 1831 – the HMS left Plymouth and went on a five year trip and he was on board


Mamaril’s QOTD!
“True love has no happy ending because true love has no end.”

Main three species infecting humans:
Schistosoma japonicum
Schistosoma haematobium
Radix guadras

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